Table 1 Summary of samples used for 454 sequencing
From: Diverse molecular signatures for ribosomally ‘active’ Perkinsea in marine sediments
Geographic site | Year | Depth | Size fraction | DNA | RNA |
|---|---|---|---|---|---|
Naples | 2009 | Sediment | Total | 84 (0.243%) | 54 (0.264%) |
DCMa | 0.8-3 μm | 2 (0.008%) | 0 | ||
Sub-surface | - | 0 | 0 | ||
Naples | 2010 | Sediment | Total | 24 (0.141%) | 3 (0.043%) |
DCMa | - | 0 | 0 | ||
Sub-surface | - | 0 | 0 | ||
Oslo | 2009 | Sediment | Total | 50 (0.145%) | 7 (0.024%) |
DCMa | 0.8-3 μm | 1 (0.006%) | 0 | ||
3-20 μm | 1(0.007%) | 0 | |||
Sub-surface | 0.8-3 μm | 3 (0.032%) | 0 | ||
Oslo | 2010 | Sediment | Total | 9 (0.056%) | 1 (0.008%) |
DCMa | 0.8-3 μm | 1 (0.007%) | 0 | ||
Sub-surface | 0.8-3 μm | 3 (0.019%) | 0 | ||
20 μm-total | 3 (0.021%) | 4 (0.034%) | |||
Barcelona | 2010 | Sediment | Total | 1 (0.105%) | 1 (0.023%) |
DCMa | - | 0 | 0 | ||
Sub-surface | - | 0 | 0 | ||
Roscoff | 2010 | Sediment | Total | 8 (0.112%) | 2 (0.069%) |
DCMa | - | 0 | 0 | ||
Sub-surface | 0.8-3 μm | 3 (0.027%) | 0 |