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Table 3 Identity of bacteria isolated from peptides or amino acids enrichments

From: Ammonia production by human faecal bacteria, and the enumeration, isolation and characterization of bacteria capable of growth on peptides and amino acids

Isolate

Vol/ diln

Identification

% Sim

Phylum

Class

Order

Accession no.

Peptides

      

1

O1/5

Clostridium perfringens

99

Firmicutes

Clostridia

Clostridiales

GU968162

3

O1/5

Clostridium orbiscindens

99

Firmicutes

Clostridia

Clostridiales

GU968163

5

O1/5

Shigella sonnei

98

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968164

6

O1/6

Enterococcus faecium

99

Firmicutes

Bacilli

Lactobacillales

GU968165

8

O1/6

Bacteroides ovatus

99

Bacteroidetes

Bacteroidia

Bacteroidales

GU968166

12

O2/5

C. orbiscindens

97

Firmicutes

Clostridia

Clostridiales

893 bp

13

O2/5

Clostridium innocuum

98

Firmicutes

Clostridia

Clostridiales

GU968167

14

O2/5

B. ovatus

93

Bacteroidetes

Bacteroidia

Bacteroidales

GU968168

15

O2/5

Blautia hydrogenotrophica

95

Firmicutes

Clostridia

Clostridiales

GU968169

16

O2/6

C. orbiscindens

95

Firmicutes

Clostridia

Clostridiales

877 bp

17

O2/6

C. orbiscindens

99

Firmicutes

Clostridia

Clostridiales

GU968170

21

V1/5

Bacteroides fragilis

99

Bacteroidetes

Bacteroidia

Bacteroidales

GU968171

22

V1/5

Escherichia coli

99

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968172

23

V1/5

B. fragilis

98

Bacteroidetes

Bacteroidia

Bacteroidales

GU968173

25

V1/6

B. fragilis

99

Bacteroidetes

Bacteroidia

Bacteroidales

GU968174

27

V1/6

E. faecium

99

Firmicutes

Bacilli

Lactobacillales

GU968175

Amino acids

      

29

O1/6

Shigella sp.

100

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968176

31

O1/6

Staphylococcus sp.

99

Firmicutes

Bacilli

Bacillales

GU968177

33

O1/7

Shigella flexneri

98

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968178

34

O1/7

Eggerthella lenta

96

Actinobacteria

Coriobacteridae

Coriobacteriales

GU968179

35

O1/7

S. flexneri

98

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968180

39

O2/6

Clostridium scindens

98

Firmicutes

Clostridia

Clostridiales

GU968181

42

O2/7

Ruminococcus sp.

96

Firmicutes

Clostridia

Clostridiales

One strand only

45

V1/5

E. coli

98

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968182

46

V1/5

E. coli

98

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968183

48

V1/5

E. coli

99

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968184

49

V1/5

E. coli

99

Proteobacteria

Gammaproteobacteria

Enterobacteriales

GU968185

50

V1/6

E. coli

99

Proteobacteria

Gammaproteobacteria

Enterobacteriales

885 bp