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Table 1 Number of genes up or down-regulated, detected with the stress and virulence thematic array, under different experimental conditions

From: Non-essential genes form the hubs of genome scale protein function and environmental gene expression networks in Salmonella entericaserovar Typhimurium

  

Heat

H2O2

Acid

NaCl

No stress

aInduced only in this condition

  

No O2

O2

No O2

O2

No O2

O2

No O2

O2

Heat

No O2

+72 & -76*

+51 & -48

+42 & -39

+32 & -36

+44 & -29

+30 & -39

+16 & -17

+23 & -31

4: sptP, iacP, mgtA, ssaR

O2

 

+109 & -88

+58 & -50

+50 & -48

+53 & -40

+49 & -52

+19 & -21

+33 & -37

H2O2

No O2

  

+112 & -76

+55 & -46

+59 & -42

+44 & -47

+19 & -23

+20 & -33

10: fur, folE, sdiA, yicC, cheM, polA, sitA, entD, dsrA, fadA

O2

   

+76 & -76

+47 & -42

+47 & -55

+19 & -15

+20 & -39

Acid

No O2

    

+99 & -71

+59 & -52

+19 & -20

+28 & -27

5: pmrA (basR), fkpA, pmrF, yhjC, cadB

O2

     

+76 & -96

+18 & -21

+19 & -42

NaCl

No O2

      

+28 & -29

+5 & -14

6: proX, dps, hilC, ybiI, yciF, yehY

No stress

No O2

       

+62 & -79

8: prgI, prgK, hycB, hypE, nfnB, rfaB, rt, prgJ

  1. *The diagonal of the matrix shows the total number of genes up (+) and down (−) regulated in each condition (underlined). Values in other positions show the number of common genes up (+) and down (−) regulated in both conditions.
  2. aGenes induced exclusively under one condition (not affected or repressed under the other conditions).