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Table 1 Number of alleles and variation in repeat span per polymorphic locus

From: Multilocus variable-number tandem-repeat genotyping of Renibacterium salmoninarum, a bacterium causing bacterial kidney disease in salmonid fish

Marker locus name*

Number of alleles

Repeat number/span (bp)

BKD23

4

3.7–6.7/33–60

BKD92

2

2.5–5.5/27–63

BKD143

5

9–14/37–57

BKD305

5

2.2–8.2/15–51

BKD396

2

2.6–4.6/16–32

BKD494

2

1.5–2.5/42–72

BKD526

2

1.5–2.5/42–72

BKD584

3

2.1–4.1/48–95

BKD694

3

1.9–2.9/19–27

BKD1023

2

1–2/37–71

BKD1506

3

5–8/34–56

BKD1850

2

4–5/43–55

BKD1935

3

1–3/52–154

BKD2126

8

5.3–11.3/37–79

BKD2770

4

2.8–4.8/26–44

BKD3038

2

2.6–4.6/46–81

  1. *locus name reflects its position within genome of R. salmoninarum reference isolate ATCC33209T (Accession number NC_010168). Loci in italics represent a minimum combined loci required to sufficiently recognized 17 R. salmoninarum haplotypes with the HGDI of value 0.81.