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Table 3 PCR primer pairs used for targeting invA gene for detection of Salmonella

From: Development of a sensitive and specific qPCR assay in conjunction with propidium monoazide for enhanced detection of live Salmonellaspp. in food

Primer sequence (5′---3′)

Type of PCR

Position

Length (bp)

Reference (year)

GCTGCGCGCGAACGGCGAAG

Conventional

586-608

389

Ferretti et al. (2001)

TCCCGGCAGAGTTCCCAT T

 

972-954

  

ACAGTGCTCGTTTACGACCT AAT

Conventional

104-127

244

Chiu and Ou (1996)

AGACGACTGGTACTGATCGATAAT

 

347-324

  

GTGAAATAATCGCCACGTTCGGGCAA

Conventional

371-396

285

Malorny and Hoorfar (2005)

TCATCGCACCGTCAAAGGAACC

 

655-634

  

GTGAAATAATCGCCACGTTCGGGCAA

Conventional

371-396

285

Rahn et al. (1992) [28]

TCATCGCACCGTCAAAGGAACC6

 

655-634

  

AGTGCTCGTTTACGACCTGAA

Conventional

106-126

229

Mainar-Jaime et. al. ( 2013) [29]

TGATCGATAATGCCAGACGA

 

334-315

  

ACAGTGCTCGTTTACGACC

Conventional

104-122

1614

Banihashemi et al. (2012) [31]

TACGCACGGAAACACGTTC

 

1717-1699

  

TTTACGGTCTATTTTGATTTG

Conventional

1350-1370

444

Arnold et al. (2004) [30]

ATATGCTCCACAAGGTTAATG

 

1703-1683

  

TTATTGGCGATAGCCTGG

Real-time

401-418

33

ABI, (1999)

CGGTGGGTTTTGTTG

 

433-419

  

TTGGCGATAGCCTGGCGGTG

Real-time

404-423

136

Braun et al. (2011) [35]

TGTTTACCGGGCATACCATCCAGAG

 

539-515

  

TCGTCATTCCATTACCTACC

Real-time

167-186

119

Hoorfar et al. (2000) [33]

AAACGTTGAAAAACTGAGGA

 

285-266

  

GATTCTGGTACTAATGGTGATGATC

Real-time

132-156

269

Liang et al. (2011) [34]

GCCAGGCTATCGCCAATAAC

 

419-400

  

GTGAAATAATCGCCACGTTCGGGCAA

Real-time

371-396

285

Chen et al. (2011) [32]

TCATCGCACCGTCAAAGGAACC

 

655-634

  

CGTTTCCTGCGGTACTGTTAATT

Real-time

281-303

130

This study

TCGCCAATAACGAATTGCCCGAAC

 

410-387

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