Table 2 Open reading frames identified in each of the 5 drug resistance-conferring plasmids
From: Identification of novel antimicrobial resistance genes from microbiota on retail spinach
Plasmid | ORF | Predicted protein length | Most similar protein, Genbank accession number | Organism | E-value | AA identity |
|---|---|---|---|---|---|---|
pAMP | 1 | 95 | Putative Iron-Chelator Esterase EL859857.1 | Bacillus Subtilis subsp inaquoaorm | 7 e-55 | 99% |
pAMP | 2 | 230 | Putative Sodium Dependent Transporter ZP_2118733.1 | Bacillus Subtilis subsp inaquoaorm | 2 e-156 | 98% |
pAMP | 3 | 378 | Sugar Efflux Transporter YP_001907636.1 | Erwinia tasmaniensis Et1/99 | 0.00 | 89% |
pAMP | 4 | 293 | Extended Sepctrum Beta-lactamase ERP-1 AAAL86999.1 | Erwinina perscina | 2 e-152 | 81% |
pAMP | 5 | 303 | Peptidyl-Dipeptidase YP_001907684.1 | Erwinia tasmaniensis Et1/99 | 8 e-154 | 86% |
pCIP | 1 | 216 | Pentapeptide-Repeat Containing Protein YP_006790167.1 | Exiguobacterium antarticum | 9 e-139 | 86% |
pCIP | 2 | 212 | Beta-lactamase Domain Containing Protein YP_006790168 | Exiguobacterium antarticum | 1 e-144 | 96% |
pTMP | 1 | 128 | Diemethyladenoanine Transferase YP_001906668.1 | Erwinia tasmanienaia | 1 e-82 | 94% |
pTMP | 2 | 125 | Protein ApaG (Protein Cor D) YP_003532282.1 | Erwinia amylovora CFBP1430 | 2 e- 78 | 88% |
pTMP | 3 | 234 | Bis (5′-nucleoayl) Tetraphosphotase YP_003740080.1 | Erwinia billingiae | 4 e- 151 | 88% |
pTMP | 4 | 171 | Protein FolA YP_ 005801502.1 | Erwinia pyrifoliae DSM 12163 | 3 e-115 | 93% |
pTMP | 5 | 91 | Rhtb Family Transporter YP_003532285.1 | Erwinina amylovora CFB1430 | 9 e-54 | 97% |
pAZT | 1 | 151 | Hypothetical Protein BsI_26310 ZP_21117554.1 | Bacillus Subtilis subsp inaquoaorm | 2 e-108 | 99% |
pAZT | 2 | 651 | Penicillin Binding Protein 2c ZP_21117553.1 | Bacillus Subtilis | 0.00 | 99% |
pSXT | 1 | 170 | Dihydrofolate Reductase YP_002875292.1 | Pseudomonas fluorsencens | 4 e-112 | 94% |
pSXT | 2 | 139 | Sodium: Dicarboxylate Symporter ZP_0778142.1 | Pseudomonas fluorsencens | 3 e-93 | 96% |