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Table 3 List of all S. H eidelberg CRISPR-MVLST S equence T ypes (HSTs) that were identified in this study

From: CRISPR-MVLST subtyping of Salmonella enterica subsp. entericaserovars Typhimurium and Heidelberg and application in identifying outbreak isolates

HST

Frequency

Allelic profile

fimH

sseL

CRISPR1

CRISPR2

HST 7

48

17

19

167

32

HST 8

1

17

19

168

209

HST 9

10

17

19

167

209

HST 10

1

17

19

169

32

HST 11

1

17

19

170

32

HST 12

1

17

19

171

32

HST 13

1

18

19

167

32

HST 14

2

17

19

179

32

HST 15

3

17

19

167

212

HST 16

1

17

19

173

213

HST 17

3

17

19

172

32

HST 18

1

17

19

178

32

HST 19

1

17

67

174

209

HST 20

1

17

19

175

32

HST 21

7

17

19

167

211

HST 22

2

17

19

167

210

HST 23

1

17

19

177

32

HST 24

1

17

19

167

214

HST 25

1

17

19

176

32

HST 26

1

17

19

177

215

HST 27

1

17

19

167

215

  1. The numbers represent the allelic identifier for the individual CRISPR-MVLST markers. The combination of four specific alleles defines a given HST. The frequency is the number of times a particular HST was observed among the 89 S. Heidelberg isolates analyzed. All HSTs identified here were new and not seen in previous studies.
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BMC Microbiology

ISSN: 1471-2180

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