Table 2 Virome alignments to assembled contigs
From: Metagenomics of rumen bacteriophage from thirteen lactating dairy cattle
Sample | All contigs | Contigs >5000Â bp | Contigs >10,000Â bp | Contigs >20,000Â bp | Contigs >30,000Â bp |
|---|---|---|---|---|---|
Average Rumen Virome* | 37.1% | 1.66% | 0.84% | 0.33% | 0.17% |
Cow 6993 [8] | 0.70% | 0.03% | 0.01% | <0.01% | 0.00% |
Cow 766 [8] | 0.56% | 0.03% | 0.01% | <0.01% | <0.01% |
Cow 7887 [8] | 1.56% | 0.03% | <0.01% | 0.00% | 0.00% |
Swine Faeces [18]+ | 0.01% | <0.01% | <0.01% | 0.00% | 0.00% |
Human Saliva [19]+ | 0.00% | 0.00% | 0.00% | 0.00% | 0.00% |
Pond [20]+ | <0.01% | 0.00% | 0.00% | 0.00% | 0.00% |