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Table 1 Arcobacter spp. strains used in this study

From: Updated 16S rRNA-RFLP method for the identification of all currently characterised Arcobacterspp

SPECIES

STRAIN

SOURCE

A. butzleri

LMG 10828T,¶,Ω, LMG 11118Ω

Human faeces

 

W24-2-1, W24-05-1, W07-01-8, W03-03-6, W26-02-2, W03-02-7, W21-05-1, W2105-3, W21-05-7, W24-01-1, W10-01-1

Sea water

 

SWDS1-3-2

Sewage

 

F42, F46Ω, F49, F51

Pork meat

 

F15, F22, F23, F24, F25

Turkey meat

 

F44, F47, F52

Chicken meat

 

F43, F50Ω, F53

Beef meat

 

F1, F2, F29, F30, F38, F98-1, SAN600-1,SAN600-6, SAN512-1, SAN547-10, SAN548-8, SAN582-1, SAN582-6

Mussels

 

T62

Soil

A. trophiarum

LMG 25534T,¶,Ω, LMG 25535¶,Ω

Pig faeces

 

CECT 7650Ω

Chicken cloacae

A. thereius

LMG 24486T,¶,Ω, LMG 24487¶,Ω

Porcine abortion foetus

 

SW24Ω

Sewage

 

F61-1Ω

Pork meat

 

F89-4

Mussels

 

F93-4Ω

Clams

A. cryaerophilus

LMG 9904T,¶,Ω, LMG 9871¶,Ω

Bovine abortion foetus

 

LMG 9865¶,Ω, LMG 10241¶,Ω, LMG 6622, LMG 10229¶,Ω

Porcine abortion

 

LMG 7537, LMG 9863¶,Ω

Ovine abortion foetus

 

LMG 10829

Human blood

 

LMG 9861¶,Ω

Bovine abortion foetus

 

FE4Ω, FE5¶,Ω, FE6¶,Ω, FE9¶,Ω, FE11Ω, FE13Ω

Chicken cloacal swabs

 

FE14Ω

Ovine faeces

 

MICV1-1¶,Ω, MICV3-2¶,Ω

Cow faeces

A. nitrofigilis

CECT 7204T,¶,Ω, LMG 7547Ω

Roots of Spartina alterniflora

 

F39Ω, F40, F72Ω

Mussels

A. skirrowii

LMG 6621T,¶,Ω

Lamb faeces

 

LMG 9911

Porcine abortion

 

Houf 989¶,Ω, Houf 994Ω

Cow faeces

 

S7Ω

Sludge

 

F94-1Ω

Clams

 

F125-1Ω

Mussels

 

ArcoEΩ, ArcoFΩ

 

A. cibarius

CECT 7203T,¶,Ω

Chicken meat

 

NC81Ω, NC88Ω

Piggery effluent

 

H742, H743Ω, H745, H746Ω, H748

Poultry carcasses

A . halophilus

LA31BT,¶,Ω

Hypersaline lagoon

A . mytili

CECT 7386T,¶,Ω, CECT 7385¶,Ω

Mussels

 

T234Ω

Brackish water

A . marinus

CECT 7727T,¶,Ω

Seawater/starfish

A . defluvii

CECT 7697T,¶,Ω, SW28-7¶,Ω, SW28-8, SW28-9, SW28-10, SW30-2¶,Ω, SW30-7, SW30-8

Sewage

 

MICCC4-2Ω

Pig faeces

 

SAN599-9Ω

Mussels

A . molluscorum

CECT 7696T,¶,Ω, F91¶,Ω, F101-1¶,Ω

Mussels

A . ellisii

F79-6T,¶,Ω, F79-2¶,Ω, F79-7¶,Ω

Mussels

A . bivalviorum

F4T,¶,Ω, F118-2¶,Ω, F118-4¶,Ω

Mussels

A . venerupis

F67-11T,¶,Ω

Clams

A . suis

F41T,¶,Ω

Pork meat

A . cloacae

SW28-13T,¶,Ω

Sewage

 

F26¶,Ω

Mussels

  1. ATCC American Type Culture Collection, LMG Belgian Co-ordinated Collection of Micro-organisms, CECT Colección Española de Cultivos Tipo.
  2. ¶ Sequenced 16S rRNA gene.
  3. Ω Sequenced rpoB gene.