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Table 1 Distribution of the 331 S. pneumoniae isolates

From: Multiple-locus variable-number tandem-repeat analysis of Streptococcus pneumoniae and comparison with multiple loci sequence typing

Sequence Types (ST)

Serotypes

Number of Isolates

Singletons

MLVA Types (MT)

Clonal Complexes (CC)

  

Per Serotype

Total

   

9

8

1

33

0

199

CC8

19 F

2

 

0

228, 182

14

30

 

0

199, 304, 375, 280, 337, 272, 367, 350, 365,, 354, 347, 383, 378

65

18C

1

33

0

209

CC5

22A

1

 

0

172,

6A

29

 

0

172, 334, 271, 324, 314, 177, 176, 173, 358, 363, 257

6B

2

 

0

172, 206

138

6B

30

30

5

234, 330, 276, 251, 268

CC1

311, 345, 310, 326, 289, 181, 369, 319, 344, 370, 315, 273, 246, 295, 254, 269, 356, 233, 213, 237, 210, 290, 329

156

14

4

34

0

299, 249, 190, 229

CC9

6B

1

 

0

207

9 V

29

 

1

179, 184, 204, 192, 343, 168, 188, 187, 169, 277, 198, 113, 328, 352, 171, 200, 278, 279, 183, 189, 205, 174, 175, 287

162 MC162a

1

1

33

0

364

CC9

14

1

 

0

225

19 F

14

 

3

270, 300, 301, 325, 368, 239, 309, 323, 372, 348, 374, 346, 341

MC162b

9 V

4

 

2

263, 281, 252

CC10

19 F

1

 

0

351

6B

1

 

0

227

9 V

11

 

0

265, 306, 245, 258, 293, 336

176

6B

3

31

0

193, 377

CC11

 

27

 

3

282, 274, 214, 371, 307, 224, 219, 338, 178, 313, 305, 262, 170, 361, 267, 266, 340, 335, 185, 196, 253, 236, 217, 308

CC4

6A

1

 

0

224

CC4

180

14

1

33

0

129

CC7

19 F

1

 

0

223

3

30

 

2

331, 296, 288, 156, 232, 138, 285, 238, 222, 384, 312, 248, 327, 349, 360, 230, 294, 240, 318, 320

7 F

1

 

0

222

199

15B

7

42

1

180, 191, 194, 256, 195, 216, 220

CC6

15C

4

 

1

243, 366, 362

19A

29

 

0

235, 283, 231, 203, 297, 316, 302, 317, 376, 292, 379, 333, 359, 242, 259, 244, 355, 284, 260, 339

19 F

1

 

0

197

9 N

1

 

0

203

227

1

29

32

0

215, 380, 250, 255, 186, 211, 201, 322, 298, 247, 357, 342, 376, 264, 382, 275

CC3

14

1

 

0

186

6A

2

 

0

211, 226

306

1

29

29

0

85, 261, 130, 353, 212, 241, 221, 202, 303, 381

CC2

  1. Bold MTs are referring to singletons.