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Table 3 Numbers and diversity of bacterial, archaeal and fungal sequences

From: Molecular analysis of meso- and thermophilic microbiota associated with anaerobic biowaste degradation

Group

Load*)

Reactor type

Sample name

Number of seq.

Average read length**)

Observed OTUs

Diversity (Shannon)

Diversity (Simpson)

Richness (Chao1)

Richness (Ace)

Bact.

3

meso

M1

5775

151

610

4,11

0,09

1304

2044

 

8

meso

M2

4531

151

483

4,43

0,04

1171

1631

 

3

thermo

M3

2056

142

444

4,68

0,05

1065

2070

 

8

thermo

M4

5083

146

438

3,87

0,07

1127

1827

Arch.

3

meso

M1

7926

104

135

2,33

0,17

318

510

 

8

meso

M2

5593

109

109

1,85

0,33

227

339

 

3

thermo

M3

5521

106

95

1,02

0,56

227

375

 

8

thermo

M4

10573

107

167

1,66

0,34

387

565

Fungi

3

meso

M1

2850

147

456

4,43

0,06

1068

1609

 

8

meso

M2

8714

233

1602

5,57

0,03

3192

4485

 

3

thermo

M3

8460

209

1386

5,12

0,05

2617

4304

 

8

thermo

M4

16893

220

2162

5,22

0,06

3393

4516

  1. *) kg VS m-3.
  2. **) after removing adapters and primers.