Table 1 Nearest matches of 16S rRNA sequences (~640 bp long) of selected genotypes gut-associated actinobacteria from Pentatomidae
From: The gastric caeca of pentatomids as a house for actinomycetes
Amplified from | Clones | Similarity with type-strain | %phylotypea | |
|---|---|---|---|---|
Nearest match | Identity (%) | |||
Dichelops melacanthus | IIL-cDm-9s1 | Dietzia maris DSM 43672T (X79290) | 93.9 | 26.7 |
IIL-cDm-9s2 | Propionibacterium granulosum DSM 20700T (AJ003057) | 99.2 | 13.3 | |
IIL-cDm-9s3 | Citricoccus parietis 02-Je-010T (FM992367) | 96.0 | 13.3 | |
IIL-cDm-9s4 | Citricoccus parietis 02-Je-010T (FM992367) | 98.4 | 6.7 | |
IIL-cDm-9s9 | Corynebacterium durum IBS G1503T (Z97069) | 97.2 | 6.7 | |
IIL-cDm-9s23 | Dietzia timorensis ID05-A0528T (AB377289) | 95.5 | 6.7 | |
IIL-cDm-9s24 | Brevibacterium permense VKM Ac-2280T (AY243343) | 99.5 | 6.7 | |
IIL-cDm-9s26 | Brevibacterium permense VKM Ac-2280T (AY243343) | 99.5 | 13.3 | |
IIL-cDm-9s27 | Kineococcus marinus KST3-3T (DQ200982) | 98.8 | 6.7 | |
Edessa meditabunda | IIL-cEm-14s4 | Corynebacterium freiburgense 1045T (FJ157329) | 97.3 | 6.3 |
IIL-cEm-14s8 | Pseudoclavibacter chungangensis CAU59T(FJ514934) | 96.7 | 31.3 | |
IIL-cEm-14s9 | Citricoccus parietis 02-Je-010T (FM992367) | 98.8 | 25.0 | |
IIL-cEm-14s10 | Corynebacterium variabile DSM 20132T (AJ222815) | 98.3 | 25.0 | |
IIL-cEm-14s21 | Arthrobacter protophormiae DSM 20168T (X80745) | 99.8 | 12.5 | |
Loxa deducta | IIL-cLd-3s2 | Dietzia timorensis ID05-A0528T (AB377289) | 95.9 | 37.5 |
IIL-cLd-3s5 | Mycobacterium llatzerense MG13T (AJ746070) | 95.6 | 50.0 | |
IIL-cLd-3s10 | Dietzia timorensis ID05-A0528T (AB377289) | 95.5 | 6.3 | |
IIL-cLd-3s21 | Ornithinimicrobium kibberense K22-20T (AY636111) | 97.3 | 6.3 | |
Nezara viridula | IIL-cNv-20s10 | Streptomyces puniceus NBRC 12811T (AB184163) | 100.0 | 20.0 |
IIL-cNv-20s17 | Streptomyces violascens ISP 5183T (AY999737) | 99.8 | 27.5 | |
IIL-cNv-20s19 | Streptomyces puniceus NBRC 12811T (AB184163) | 98.4 | 52.5 | |
Pellaea stictica | IIL-cPs-1s22 | Mycobacterium phocaicum CIP 108542T (AY859682) | 99.2 | 25.0 |
IIL-cPs-1s25 | Ornithinimicrobium kibberense K22-20T (AY636111) | 96.5 | 37.5 | |
IIL-cPs-1s26 | Dietzia timorensis ID05-A0528T (AB377289) | 95.9 | 37.5 | |
Piezodorus guildinii | IIL-cPg-8s3 | Mycobacterium phocaicum CIP 108542T (AY859682) | 96.6 | 73.3 |
IIL-cPg-8s5 | Propionibacterium acnes KPA171202T (AE017283) | 98.8 | 13.3 | |
IIL-cPg-8s21 | Propionibacterium acnes KPA171202T (AE017283) | 99.8 | 13.3 | |
Thyanta perditor | IIL-cTp-5s2 | Actinomyces naeslundii NCTC 10301T (X81062) | 97.1 | 11.1 |
IIL-cTp-5s4 | Corynebacterium variabile DSM 20132T (AJ222815) | 98.6 | 5.6 | |
IIL-cTp-5s5 | Mycobacterium phocaicum CIP 108542T (AY859682) | 96.4 | 44.4 | |
IIL-cTp-5s8 | Actinomyces meyeri CIP 103148T (X82451) | 98.6 | 5.6 | |
IIL-cTp-5s10 | Curtobacterium ginsengisoli DCY26T (EF587758) | 92.5 | 5.6 | |
IIL-cTp-5s24 | Corynebacterium stationis LMG 21670T (AJ620367) | 99.4 | 11.1 | |
IIL-cTp-5s28 | Corynebacterium variabile DSM 20132T (AJ222815) | 98.4 | 16.7 | |