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Table 4 Select genes whose expression levels responded to long-term (24 hr) perturbation with PEG8000 (FDR < 0.05, fold-difference > 2).

From: Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacterium Sphingomonas wittichii

Gene ID

Gene Product

PEG8000 expression fold-change

Regulation type

Swit_0212

flagellin-specific chaperone FliS-like protein

3.9

down

Swit_0213

flagellar hook-associated 2 domain-containing protein

3.3

down

Swit_0565

type IV pilus assembly PilZ

2.5

down

Swit_0615

Flp/Fap pilin component

2.4

down

Swit_0616

Flp/Fap pilin component

4.9

down

Swit_1260

flagellar motor protein MotA

2.7

down

Swit_1261

flagellin domain-containing protein

2.4

down

Swit_1262

flagellar hook-associated protein FlgK

2.9

down

Swit_1264

flagellar basal body P-ring protein

3.1

down

Swit_1266

flagellar basal body rod protein FlgG

2.4

down

Swit_1268

flagellar basal body FlaE domain-containing protein

2.3

down

Swit_1269

flagellar hook capping protein

2.1

down

Swit_1270

flagellar basal-body rod protein FlgC

3.3

down

Swit_1271

flagellar basal-body rod protein FlgB

2.3

down

Swit_1275

putative anti-sigma-28 factor, FlgM

3.0

down

Swit_1281

RNA polymerase, sigma 28 subunit, FliA/WhiG

2.3

down

Swit_1283

flagellin domain-containing protein

3.3

down

Swit_1284

flagellin domain-containing protein

2.6

down

Swit_1286

flagellar hook-basal body complex subunit FliE

4.4

down

Swit_1287

flagellar M-ring protein FliF

2.9

down

Swit_1293

flagellar basal body-associated protein FliL

3.8

down

Swit_1458

flagellar motor switch protein FliM

3.3

down