Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia

Chanturia, Gvantsa; Birdsell, Dawn N; Kekelidze, Merab; Zhgenti, Ekaterine; Babuadze, George; Tsertsvadze, Nikoloz; Tsanava, Shota; Imnadze, Paata; Beckstrom-Sternberg, Stephen M; Beckstrom-Sternberg, James S; Champion, Mia D; Sinari, Shripad; Gyuranecz, Miklos; Farlow, Jason; Pettus, Amanda H; Kaufman, Emily L; Busch, Joseph D; Pearson, Talima; Foster, Jeffrey T; Vogler, Amy J; Wagner, David M; Keim, Paul

doi:10.1186/1471-2180-11-139

BMC Microbiology

Table 2 Francisella tularensis subsp. holarctica isolates from the country of Georgia used in this study.

From: Phylogeography of Francisella tularensis subspecies holarctica from the country of Georgia

ID^a	State/Province	County/Region	Location^b	Source	Date	SNP Subclade^c	MLVA Genotype^d
F0677	Shida Kartli	Gori	village Lamiskana	Haemaphysalis otophila	03/00/2008	B.Br.027/028	A
F0658	Shida Kartli	Kaspi	village Rene	water	00/00/2007	B.Br.028/029	B
F0660	Shida Kartli	Gori	village Nadarbazevi	Dermacentor marginatus	00/00/2004	B.Br.028/029	C
F0662	Samtskhe-Javakheti	Akhaltsikhe	village Minadze	fleas	00/00/1997	B.Br.028/029	B
F0674	Shida Kartli	Kaspi	village Rene	Dermacentor marginatus	04/00/2007	B.Br.028/029	B
F0675	Shida Kartli	Gori	village Nadarbazevi	Haemaphysalis otophila	04/00/2007	B.Br.028/029	B
F0678	Shida Kartli	Kaspi	village z/Rene	Dermacentor marginatus	06/00/2008	B.Br.028/029	C
F0679	Shida Kartli	Kaspi	village z/Rene	Haemaphysalis sulcata	06/00/2008	B.Br.028/029	D
F0659	Kvemo Kartli	Dmanisi	unknown	Microtus arvalis Pall.	00/00/1990	B.Br.029/030	A
F0665	Shida Kartli	Gori	village Shavshvebi	Gamasidae ticks	00/00/1982	B.Br.029/030	A
F0666	Samtskhe-Javakheti	Aspindza	village Indusa	Dermacentor marginatus	00/00/2004	B.Br.029/030	A
F0667	Shida Kartli	Gori	village Nadarbazevi	Dermacentor marginatus	00/00/2004	B.Br.029/030	A
F0668	Shida Kartli	Gori	village Nadarbazevi	Dermacentor marginatus	00/00/2004	B.Br.029/030	A
F0669	Samtskhe-Javakheti	Ninotsminda	unknown	Dermacentor marginatus	00/00/2002	B.Br.029/030	A
F0670	Shida Kartli	Gori	village Tkviavi	Dermacentor marginatus	00/00/2004	B.Br.029/030	A
F0672	Shida Kartli	Gori	village Khurvaleti	Dermacentor marginatus	00/00/2004	B.Br.030/031	E
F0655	Kakheti	Dedoplis Tskaro	Solukh steppe	Meriones erythrurus Gray	00/00/1956	B.Br.031/032	E
F0656	Kakheti	Dedoplis Tskaro	Nazarlebi Mountain	Ixodidae tick	00/00/1956	B.Br.Georgia	E
F0657	Shida Kartli	Tskhinvali	village Khetagurov	Sorex sp.	00/00/1974	B.Br.Georgia	E
F0661	Samtskhe-Javakheti	Akhaltsikhe	village Klde	Microtus socialis Pall.	00/00/1992	B.Br.Georgia	E
F0663	Shida Kartli	Kareli	village Ruisi	Ixodidae tick	00/00/1997	B.Br.Georgia	E
F0664	Shida Kartli	Kareli	village Ruisi	wheat	00/00/1997	B.Br.Georgia	E
F0671	unknown	unknown	East Georgia	unknown	unknown	B.Br.Georgia	E
F0673	unknown	unknown	East Georgia	unknown	unknown	B.Br.Georgia	E
F0676	Shida Kartli	Gori	village Nadarbazevi	Dermacentor marginatus	05/00/2007	B.Br.Georgia	E

^aStrain ID in the Northern Arizona University DNA collection
^bCity, Town, or Village
^ccanSNP lineage
^dGenotypes (A to E) determined by MLVA11 system (Vogler et al, 2009).

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ISSN: 1471-2180

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