Primer name | Sequence (5' to 3') | Target gene | Annealing temp. (°C) | Amplicon size (bp) | Reference |
---|---|---|---|---|---|
B52 | AGGCTTCGTCACAGTTG | eaeA | 50 | 570 | [39] |
B53 | CCATCGTCACCAGAGGA | Â | Â | Â | Â |
B54 | AGAGCGATGTTACGGTTTG | stx1 | 50 | 388 | [39] |
B55 | TTGCCCCCAGAGTGGATG | Â | Â | Â | Â |
B56 | TGGGTTTTTCTTCGGTATC | stx2 | 50 | 807 | [39] |
B57 | GACATTCTGGTTGACTCTCTT | Â | Â | Â | Â |
wzx-wzyO26-F | AAATTAGAAGCGCGTTCATC | wzx O26 | 56 | 596 | [41] |
wzx-wzyO26-R | CCCAGCAAGCCAATTATGACT | Â | Â | Â | Â |
fliC-H11-F | ACTGTTAACGTAGATAGC | fliC H11 | 56 | 224 | [41] |
fliC-H11-R | TCAATTTCTGCAGAATATAC | Â | Â | Â | Â |
B139 | CRCCKCCAYTACCTTCACA | tir β | 53 | 560 | [27] |
B140 | GATTTTTCCCTCGCCACTA | Â | Â | Â | Â |
tir(591-1617)-F | TCCAAATAGTGGCGAGGGAA | tir β | 54 | 1026 | This study |
tir(591-1617)-R | TTAAACGAAACGTGCGGGTC | Â | Â | Â | Â |
B73 | TACTGAGATTAAGGCTGATAA | eae β | 50 | 520 | [27] |
B137 | TGTATGTCGCACTCTGATT | Â | Â | Â | Â |
eae(37-1142)-F | CGGCACAAGCATAAGCTAAA | eae β | 51 | 1105 | This study |
eae(37-1142)-R | AGTTTACACCAACGGTCGCC | Â | Â | Â | Â |
eae(1001-2046)-F | TCCGCTTTAATGGCTATTTACC | eae β | 50 | 1045 | This study |
eae(1001-2046)-R | TGCCTTCGCTGTTGTTTTAT | Â | Â | Â | Â |
eae(2319-2972)-F | GGCTCTGCAAAGAACTGGTT | eae β | 50 | 653 | This study |
eae(2319-2972)-R | AGTCTCTATCAAACAAGGATACACG | Â | Â | Â | Â |
tccP2-F | ATGATAAATAGCATTAATTCTTT | tccP2 | 56 | 753 | [24] |
tccP2-R | TCACGAGCGCTTAGATGTATTAAT | Â | Â | Â | Â |