Table 1 MIRU-VNTR characteristics
Oligonucleotide primers | |||||||||
|---|---|---|---|---|---|---|---|---|---|
Forward primer | Reverse primer | Repeat size (bp) | Size of the amplicons (range, bp) | %a | |||||
3 (Bull et al.) | 5'-ACATTCACCCTGTCCATTC-3' | 5'-CCTCCTTACGGAGCAGGAA-3' | 53 | 200-350 | - | ||||
MIN 18 | 5'-GCCGAACCATTTGGCGAAC-3' | 5'-GGATTCGGCCGCGCAATTC-3' | 56 | 200-500 | 98 | ||||
MIN 19 | 5'-CATGGTTCGCCCTCTACAC-3' | 5'-TAGGGGCAGGTCATCGAAG-3' | 53 | 200-380 | 98 | ||||
MIN 20 | 5'-GCTGAGCTACAGCCTCGAC-3' | 5'-CGACGCCGATGACGTAAAC-3' | 55 | 320-620 | 98 | ||||
MIN 22 | 5'-TCAGGAATGGGTCCGGTTC-3' | 5'-AGCTCGTGACGACGGAAAC-3' | 57 | 200-450 | 98 | ||||
MIN 31 | 5'-CGACCGCATCCAGAAACAG-3' | 5'-GCTCTATGACGACCTCAAG-3' | 57 | 280-420 | 95 | ||||
MIN 33 | 5'-GTGCAGTTCAACCACGAAC-3' | 5'-GGCGTTGAACACGTTGGTG-3' | 54 | 350-750 | 95 | ||||