Table 1 Classification of environments
Supertype | Type | Subtype | Samples | OTUs | Seqs |
|---|---|---|---|---|---|
Coastal waters | 65 | 3620 | 8596 | ||
Open waters | 159 | 5087 | 13088 | ||
Saline waters (300) | Deep waters | 34 | 1752 | 3621 | |
Lakes | 23 | 727 | 973 | ||
Other | 19 | 964 | 1452 | ||
Saline sediment (199) | 199 | 8514 | 14300 | ||
Aquifers | 42 | 1606 | 2087 | ||
Aquatic (127) | Groundwaters | 47 | 1768 | 3212 | |
Freshwaters (501) | Lakes | 131 | 4326 | 8505 | |
Rivers | 67 | 2823 | 5467 | ||
Drinking waters | 14 | 504 | 983 | ||
Wastewaters | 200 | 5659 | 9139 | ||
Freshwater sediment (101) | 101 | 4279 | 6670 | ||
Freshwaters-Saline waters interfase (31) | 31 | 1047 | 1835 | ||
Marine host-associated (145) | 145 | 5116 | 8029 | ||
Agricultural | 110 | 8324 | 18987 | ||
Arctic | 59 | 4186 | 6749 | ||
Arid | 30 | 1344 | 1738 | ||
Cave | 21 | 682 | 1010 | ||
Soil (584) | Forest | 63 | 4980 | 7880 | |
Terrestrial (732) | Grassland | 14 | 4910 | 5860 | |
Rocks | 67 | 2920 | 4039 | ||
Saline | 27 | 1365 | 2859 | ||
Other | 193 | 10360 | 17297 | ||
Plants (148) | Rhizosphere | 100 | 4779 | 7664 | |
Other | 48 | 1888 | 3741 | ||
Thermal (190) | Hydrothermal (79) | 79 | 2981 | 5077 | |
Geothermal (111) | 111 | 2705 | 6027 | ||
Animal host (52) | 52 | 1292 | 2661 | ||
Human | 87 | 9715 | 54725 | ||
Cattle | 73 | 3418 | 6519 | ||
Gastrointestinal tract (331) | Mouse | 19 | 3582 | 18330 | |
Host-associated (463) | Insect | 79 | 3545 | 8838 | |
Other | 73 | 2384 | 4556 | ||
Oral (39) | 39 | 886 | 10546 | ||
Vagina (12) | 12 | 314 | 2674 | ||
Other tissue (29) | 29 | 1553 | 6521 | ||
Aerial (11) | 11 | 1641 | 3938 | ||
Oil (51) | 51 | 1202 | 1902 | ||
Compost | 52 | 1607 | 2639 | ||
Food treatment | 20 | 368 | 1117 | ||
Artificial (640) | Industrial | 222 | 4997 | 8192 | |
Other (569) | Mines | 107 | 3836 | 6157 | |
Other | 39 | 1645 | 2628 | ||
Soil-Saline waters interf (13) (13(13) | 13 | 2334 | 3989 | ||
Soil-Freshwaters interfase(54) iiinterfasinterfase(54) | 54 | 3278 | 5106 | ||
Unknown (200) | 200 | 6329 | 10889 |