Patient | Strain code | Clinical sample | Mycobacterial specie | Spoligotyping Share type (ST) number | RFLP cluster | MIRU-VNTR (code number) |
---|---|---|---|---|---|---|
1 | IPN 24 | Pleural effusion | MTb | ST42 | 16 | 23'3216153321 |
IPN 25 | urine | MTb | ST42 | 16 | 225225153323 | |
2 | IPN 29 | Urine | MTb | ST732 | 12 | 220326153322 |
IPN 31 | Sputum | MTb | ST732 | 12 | 223326153322 | |
3 | IPN 64 | Urine | MTb | ST119 | 9 | 223224153323 |
IPN 67 | Bronchoalveolar lavage fluid | MTb | ST119 | 10 | 23'3226133321 | |
4 | IPN 69 | Urine | MTb | ?h | 23 | 332226153322 |
IPN 70 | Bronchoalveolar lavage fluid | MTb | ?h | 23 | 225223153322 | |
5 | IPN 74 | Urine | MTb | ST50 | 1 | 223225123322 |
IPN 75 | Sputum | MTb | ST50 | 1 | 224325153324 | |
6 | IPN 10 | Bone marrow | MTb | ST42 | 15 | 23'3226133321 |
IPN 11 | Sputum | MTb | ST42 | 15 | 225225153323 | |
IPN 12 | Bronchoalveolar lavage fluid | MTb | ST42 | 15 | 225226143323 | |
7 | IPN 15 | Pleural effusion | MTb | ?b | ● | 223326133321 |
IPN 16 | Sputum | MTb | ?b | ● | 223326133321 | |
IPN 17 | Gastric fluid | MTb | ?b | ● | 223226133322 | |
8 | IPN 85 | Bone marrow | MTb | ST508 | 8 | 220225150020 |
IPN 86 | Bronchoalveolar lavage fluid | MTb | ST508 | 8 | 223225153321 | |
IPN 87 | Sputum | MTb | ST508 | 8 | 220005153320 | |
9 | IPN 43 | Pleural effusion | M. bovis | ST1306 | ND | 232224253322 |
IPN 99 | Lymph node | M. bovis | ST1625 | ND | 232224253322 | |
10 | IPN 56 | Urine | M. bovis | ST409 | ND | 232224153323 |
IPN 57 | Sputum | M. bovis | ST409 | ND | 222224053320 | |
IPN 58 | Cerebrospinal fluid | M. bovis | ?i | ND | 232224253322 | |
11 | IPN 46 | Cerebrospinal fluid | M. bovis | ST683 | ND | 232224152320 |
IPN 47 | Cerebrospinal fluid | M. bovis | ST479 | ND | 332224153322 | |
IPN 48 | Gastric fluid | M. bovis | ?j | ND | 232225153322 | |
IPN 49 | Sputum | M. bovis | ST479 | ND | 332225153322 | |
12 | IPN 1 | Bone marrow | M. avium | ND | ND | ND |
IPN 3 | Gastric fluid | M. avium | ND | ND | ND | |
13 | IPN 41 | Bone marrow | M. avium | ND | ND | ND |
IPN 60 | Lymph node | M. avium | ND | ND | ND |