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Table 2 Morons identified among phages and PI in Burkholderia species.

From: Genetic and phenotypic diversity in Burkholderia: contributions by prophage and phage-like elements

Predicted Moron Function*

Species with closest BLAST hit

Phages

             

Abortive infection resistance

Thiobacillus denitrificans

PI-1710b-3

             

Addiction module (killer - antidote)

Rhodopseudomo-nas palustris

Ï•K96243

Ï•E12-2

GI15

PI-S13-3

          

Aromatic compound degradation (2 genes)

Sphingomonas wittichii

GI3

             

Colicin (cvaB)

Psedomonas aeruginosa

PI-Pasteur-3

             

Colicin (ompA)

Cupriavidus taiwanensis

PI-1710b-3

PI-Pasteur-3

            

CW surface anchor 1

Cupriavidus metallidurans

PI-Pasteur-2

             

CW surface anchor 2 proteophosphoglycan 5

Cupriavidus metallidurans

PI-1710b-3

PI-Pasteur-2

PI-Pasteur-3

           

HNH motif (DNA endonuclease)

Xanthomonas albilineans

Ï•644-2

Ï•1026b

Ï•E125

PI-1710b-2

         

ImpA family protein

Ralstonia solanacearum

PI-1710b-3

PI-Pasteur-3

            

PAPS reductase

Verminephrobacter eiseniae

Ï•E125

Ï•644-2

PI-E264-3

           

Patatin-like phospholipase (1)

Frankia sp.

PI-1710b-2

             

Patatin-like phospholipase (2)

Alteromonas macleodii

PI-LB400-1

             

Phage growth limitation system (pglY, pglZ)

Polaromonas naphthalenivorans

PI-E264-1

             

Pyocin repressor protein (PrtR)

Ralstonia picketti

PI-CGD1-2

PI-17616-1

            

Pyocin-related (R2_PP-tail formation)(1)

Xanthomonas oryzae

Ï•K96243

PI-17616-4

PI-1655-1

Ï•E202

Ï•52237

PI-CGD1-1

PI-264-4

Ï•E12-2

GI15

PI-S13-1

PI-S13-3

PI-406E-2

Ï•E265

BcepMu

Pyocin-related (R2_PP-tail formation)(2)

Azotobacter vinelandii Phage

Ï•K96243

PI-17616-4

PI-1655-1

Ï•E202

Ï•52237

PI-CGD1-1

PI-S13-1

Ï•E12-2

GI15

PI-E264-2

PI-S13-3

PI-406E-2

  

Pyocin-related (TraC domain)

Pseudomonas fluorescens

PI-406E-2

             

Reverse transcriptase (UG1)

Ralstonia eutropha

GI3

             

Reverse transcriptase (UG3 & 8)

Providencia stuartii

GI3

             

Soluble lytic murein trans glycolase

Sideroxydans lithotrophicus

Ï•E255

BcepMu

            

TA system (relE)

Beggiatoa sp. PS

Ï•1026b

Ï•E125

Ï•644-2

PI-1710b-2

         

TI secretion (tolC)

Psedomonas aeruginosa

PI-Pasteur-3

             

TII secretion (eha)

Chromobacterium violaceum

Ï•E255

BcepMu

            

TIII restriction-modification system (2 genes)

Aromatoleum aromaticum

PI-1710b-3

             

Type I restriction-modification system (4 genes)

Acidovorax sp.

PI-Pasteur-3

             
  1. *Morons were identified as described in Methods. Phages listed in each column contain the predicted moron function. Non-Burkholderia species that have the closest protein as identified by BLASTp (E value less than 10-3) are presented.