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Table 1 Sources and descriptions of bacteriophage and putative prophage islands (PI) used in this study.

From: Genetic and phenotypic diversity in Burkholderia: contributions by prophage and phage-like elements

A. Isolated bacteriophages         
Phage (Acc #) Source Description Size (Mb) # ORFs Head diameter (nm) Tail (length × diameter) (nm) Plaque diameter (mm) pfu/mL
φ52237 (NC_007145) Bp Pasteur 52237   37.6 47 55 155 × 23 1.5 - 2.0 3 × 106
φ644-2 (NC_009235) Bp 644 Australia; disease (ulcer) 48.7 71 60 190 × 9 1.0 3 × 103
φE12-2 (NC_009236) Bp E12-2 NE Thailand; soil 36.7 50 62 152 × 21 1.5 - 2.0 1 × 101
φE202 (NC_009234) Bt E202 NE Thailand; soil 35.7 48 65 140 × 21 1.5 - 2.0 2 × 105
φE255 (NC_009237) Bt E255 central Thailand; soil 37.4 55 64 143 × 21 0.5 2 × 103
B. Inferred prophages         
Prophage-like island Source ORFs Size (Mb) # ORFs Chromosome Description   
PI S13-1 Bp S13 BURPSS13_G0002-G0044; BURPSS13_I0965-I0971 38.0 48 I putative prophage   
PI S13-2 Bp S13 BURPSS13_T0353-T0354; BURPSS13_K0001-K0007 9.5 9 II prophage-like   
PI S13-3 Bp S13 BURPSS13_T0561-T0598 23.4 38 II prophage-like   
PI Pasteur-2 Bp Pasteur 6068 BURPSPAST_Y0106-Y0135 42.4 30 I putative prophage   
PI Pasteur-3 Bp Pasteur 6068 BURPSPAST_P0245-P0287 60.1 45 I prophage-like   
PI 1655-1 Bp 1655 BURPS1655_F0102-F0150 36.9 48 I putative prophage   
PI 406E-1 Bp 406E BURPS406E_K0245-K0264 17.9 20 I putative prophage   
PI 406E-2 Bp 406E BURPS406E_R0182-R0256 62.9 73 I putative prophage   
PI 1710b-1 Bp 1710b BURPS1710B_1505-1536 47.0 32 I putative prophage   
PI 1710b-2 Bp 1710b BURPS1710B_1538-1604 61.1 67 I putative prophage   
PI 1710b-3 Bp 1710b BURPS1710B_3650-3669 63.0 45 I prophage-like   
PI 688-1 Bp 668 BURPS668_A2331-A2390 41.1 60 I prophage-like   
PI E264-1 (GI1) Bt E264 BTH_I0091-I0119 49.1 26 I putative prophage   
PI E264-2 (GI13) Bt E264 BTH_II1325-II1368 33.1 41 II prophage-like   
PI E264-3 (GI12) Bt E264 BTH_II1011-II1070 52.0 62 II putative prophage   
PI LB400-1 Bx LB400 Bxe_A3036-A3110 53.4 40 I putative prophage   
PI CGD1-1 Bmul CGD1 BURMUCGD1_3398-3447 37.7 51 I putative prophage   
PI CGD1-2 Bmul CGD1 BURMUCGD1_2149-2203 45.6 56 I prophage-like   
PI CGD2-1 Bmul CGD2 BURMUCGD2_1176-1227 36.6 52 I putative prophage   
PI CGD2-2 Bmul CGD2 BURMUCGD2_2461-2520 44.6 60 I prophage-like   
PI CGD2-3 Bmul CGD2 BURMUCGD2_4590-4656 49.4 67 II prophage-like   
PI 17616-1 Bmul ATCC 17616 Bmul_1771-Bmul_1998 236.3 217 I putative prophage   
PI 17616-3 Bmul ATCC 17616 Bmul_3828-Bmul_3914 73.0 80 II prophage-like   
PI 17616-4 Bmul ATCC 17616 Bmul_4831-Bmul_4876 39.4 44 II prophage-like   
GI3 (N/A) Bp K96243 putative prophage [3] 51.2 31 I putative prophage   
GI15 (N/A) Bp K96243 putative prophage[3] 35.1 38 II putative prophage   
C. Published bacteriophages        
Phage (Acc #) Source Description Size (Mb) # ORFs Chromosome Description   
Φ1026b (AY453853) Bp 1026b Siphoviridae [6] 54.9 83 I (?) prophage   
GI2; ΦK96243 (N/A) Bp K96243 Myoviridae [3] 36.4 45 I prophage   
ΦE125 (AF447491) Bt E125 Siphoviridae [52] 53.4 71 I (?) prophage   
BcepMu (AY539836) B. cenocepacia J2315 Myoviridae (Mu-like) [30] 36.7 53 III prophage   
Bcep22 (AY349011) B. cepacia Podoviridae 63.9 81 N/A prophage   
Bcep781 (AF543311) B. cepacia Myoviridae; [30] 48.2 66 N/A prophage